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📄 Abstract
Abstract: Non-destructive 3D imaging of large multi-particulate samples is essential
for quantifying particle-level properties, such as size, shape, and spatial
distribution, across applications in mining, materials science, and geology.
However, accurate instance segmentation of particles in tomographic data
remains challenging due to high morphological variability and frequent particle
contact, which limit the effectiveness of classical methods like watershed
algorithms. While supervised deep learning approaches offer improved
performance, they rely on extensive annotated datasets that are
labor-intensive, error-prone, and difficult to scale. In this work, we propose
self-validated learning, a novel self-training framework for particle instance
segmentation that eliminates the need for manual annotations. Our method
leverages implicit boundary detection and iteratively refines the training set
by identifying particles that can be consistently matched across reshuffled
scans of the same sample. This self-validation mechanism mitigates the impact
of noisy pseudo-labels, enabling robust learning from unlabeled data. After
just three iterations, our approach accurately segments over 97% of the total
particle volume and identifies more than 54,000 individual particles in
tomographic scans of quartz fragments. Importantly, the framework also enables
fully autonomous model evaluation without the need for ground truth
annotations, as confirmed through comparisons with state-of-the-art instance
segmentation techniques. The method is integrated into the Biomedisa image
analysis platform (https://github.com/biomedisa/biomedisa/).